Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 AC015910.1-201ENST00000579400 975 ntBASIC14.43□□□□□ -0.1
COL21A1Q96P44 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL21A1Q96P44 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL21A1Q96P44 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 AL133267.1-201ENST00000398220 340 ntBASIC14.42□□□□□ -0.1
COL21A1Q96P44 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TERF1P3-201ENST00000505638 1227 ntBASIC14.42□□□□□ -0.1
COL21A1Q96P44 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 AC004790.1-201ENST00000612686 536 ntBASIC14.42□□□□□ -0.1
COL21A1Q96P44 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL21A1Q96P44 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
COL21A1Q96P44 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 AC023310.3-201ENST00000557027 670 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 AC100756.1-201ENST00000562736 682 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 RARRES2P5-201ENST00000564013 466 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 AC138749.3-201ENST00000567691 622 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 AC116165.1-201ENST00000611806 668 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 AL158212.4-201ENST00000624062 1286 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms