Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ATP2A3Q93084 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP2A3Q93084 AC067750.1-201ENST00000608826 6545 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 MSTO2P-201ENST00000314835 1709 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 C2orf27AP3-201ENST00000434123 579 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 AL355994.2-201ENST00000447882 704 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 FTH1P14-201ENST00000482930 551 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC022137.2-201ENST00000503482 481 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC106760.1-201ENST00000508690 800 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC015910.1-201ENST00000579400 975 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 MIR4525-201ENST00000580000 75 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AL354718.3-201ENST00000616414 581 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 CR382287.1-201ENST00000623954 586 ntBASIC16.06■□□□□ 0.16
ATP2A3Q93084 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP2A3Q93084 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ATP2A3Q93084 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 AC138035.3-201ENST00000622706 2791 ntBASIC16.05■□□□□ 0.16
ATP2A3Q93084 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 TUBB1P2-201ENST00000422712 1306 ntBASIC16.05■□□□□ 0.16
ATP2A3Q93084 TUBB1P1-201ENST00000503144 1300 ntBASIC16.05■□□□□ 0.16
ATP2A3Q93084 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP2A3Q93084 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 ACTBP11-201ENST00000436287 1126 ntBASIC16.05■□□□□ 0.16
ATP2A3Q93084 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP2A3Q93084 MIR4313-201ENST00000580760 101 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms