Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 AC097359.2-201ENST00000604992 2389 ntBASIC17.12■□□□□ 0.33
TNFRSF25Q93038 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 AP000593.2-201ENST00000542775 1433 ntBASIC17.12■□□□□ 0.33
TNFRSF25Q93038 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.12■□□□□ 0.33
TNFRSF25Q93038 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AC009093.2-202ENST00000620513 2079 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ARSEP1-201ENST00000420443 635 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 GCOM2-201ENST00000509133 1104 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AC078819.1-201ENST00000547454 765 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AC012085.1-201ENST00000548270 765 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 AC106886.1-201ENST00000568660 600 ntBASIC17.11■□□□□ 0.33
TNFRSF25Q93038 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
TNFRSF25Q93038 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 AC016694.1-201ENST00000434179 700 ntBASIC17.1■□□□□ 0.33
TNFRSF25Q93038 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 KRT17P7-201ENST00000451704 1104 ntBASIC17.1■□□□□ 0.33
TNFRSF25Q93038 AC007551.1-201ENST00000457394 519 ntBASIC17.1■□□□□ 0.33
TNFRSF25Q93038 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 FTLP10-202ENST00000505798 471 ntBASIC17.1■□□□□ 0.33
TNFRSF25Q93038 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF25Q93038 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TNFRSF25Q93038 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF25Q93038 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFRSF25Q93038 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFRSF25Q93038 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms