Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP005482.1-201ENST00000563722 1273 ntBASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRIM48Q8IWZ4 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PDIA3P1-201ENST00000471856 1510 ntBASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 AC016694.1-201ENST00000434179 700 ntBASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 CTBP2P5-201ENST00000454986 1264 ntBASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 AC106760.1-201ENST00000508690 800 ntBASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM48Q8IWZ4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 AC007551.1-201ENST00000457394 519 ntBASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 FTH1P14-201ENST00000482930 551 ntBASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 AC087481.3-201ENST00000602886 1894 ntBASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM48Q8IWZ4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms