Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF43Q68DV7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF43Q68DV7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 C1QBPP1-201ENST00000400117 770 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC093813.1-201ENST00000605066 256 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 CU634019.7-201ENST00000624153 1185 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC005252.2-201ENST00000624630 1141 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 FP236241.2-201ENST00000624906 1185 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AC018665.1-201ENST00000622927 1362 ntBASIC15.97■□□□□ 0.15
RNF43Q68DV7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RNF43Q68DV7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF43Q68DV7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 FGD5P1-202ENST00000614866 2498 ntBASIC15.96■□□□□ 0.15
RNF43Q68DV7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AC067930.6-201ENST00000623257 4947 ntBASIC15.96■□□□□ 0.15
RNF43Q68DV7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.15
RNF43Q68DV7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AC233724.13-201ENST00000598383 410 ntBASIC15.96■□□□□ 0.15
RNF43Q68DV7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 AC107373.2-201ENST00000607735 490 ntBASIC15.96■□□□□ 0.15
RNF43Q68DV7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF43Q68DV7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF43Q68DV7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF43Q68DV7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF43Q68DV7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms