Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL16A1Q07092 AC092364.2-201ENST00000596710 2692 ntBASIC19.69■□□□□ 0.74
COL16A1Q07092 AGGF1P1-201ENST00000509500 2073 ntBASIC19.69■□□□□ 0.74
COL16A1Q07092 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.69■□□□□ 0.74
COL16A1Q07092 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
COL16A1Q07092 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 FAU-201ENST00000279259 461 ntTSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 HNRNPA1P2-207ENST00000432375 960 ntBASIC19.69■□□□□ 0.74
COL16A1Q07092 MAGEA7P-201ENST00000436482 942 ntBASIC19.69■□□□□ 0.74
COL16A1Q07092 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.69■□□□□ 0.74
COL16A1Q07092 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC19.69■□□□□ 0.74
COL16A1Q07092 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
COL16A1Q07092 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL16A1Q07092 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COL16A1Q07092 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COL16A1Q07092 AL591122.2-201ENST00000624125 1853 ntBASIC19.68■□□□□ 0.74
COL16A1Q07092 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 NRADDP-201ENST00000437305 691 ntBASIC19.68■□□□□ 0.74
COL16A1Q07092 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL16A1Q07092 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 AC087203.1-201ENST00000532111 1181 ntBASIC19.68■□□□□ 0.74
COL16A1Q07092 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC19.68■□□□□ 0.74
COL16A1Q07092 PRMT1P1-201ENST00000604252 1009 ntBASIC19.68■□□□□ 0.74
COL16A1Q07092 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL16A1Q07092 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.68■□□□□ 0.74
COL16A1Q07092 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.67■□□□□ 0.74
COL16A1Q07092 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.67■□□□□ 0.74
COL16A1Q07092 HLF-202ENST00000430986 1385 ntTSL 2 BASIC19.67■□□□□ 0.74
COL16A1Q07092 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.67■□□□□ 0.74
COL16A1Q07092 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.67■□□□□ 0.74
COL16A1Q07092 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL16A1Q07092 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.67■□□□□ 0.74
COL16A1Q07092 VENTXP4-201ENST00000449029 958 ntBASIC19.67■□□□□ 0.74
COL16A1Q07092 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.67■□□□□ 0.74
COL16A1Q07092 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
COL16A1Q07092 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 AL132994.1-201ENST00000554098 400 ntBASIC19.67■□□□□ 0.74
COL16A1Q07092 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.67■□□□□ 0.74
COL16A1Q07092 DRG2-220ENST00000583355 891 ntTSL 3 BASIC19.67■□□□□ 0.74
COL16A1Q07092 MIR6893-201ENST00000613458 69 ntBASIC19.67■□□□□ 0.74
COL16A1Q07092 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL16A1Q07092 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL16A1Q07092 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 AC092127.1-201ENST00000567093 3455 ntBASIC19.67■□□□□ 0.74
COL16A1Q07092 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.67■□□□□ 0.74
COL16A1Q07092 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
COL16A1Q07092 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL16A1Q07092 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
COL16A1Q07092 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 RN7SL767P-201ENST00000493013 295 ntBASIC19.66■□□□□ 0.74
COL16A1Q07092 AC006116.2-201ENST00000589958 988 ntBASIC19.66■□□□□ 0.74
COL16A1Q07092 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 HCG18-241ENST00000602290 821 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL16A1Q07092 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.66■□□□□ 0.74
COL16A1Q07092 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms