Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S1P61966 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S1P61966 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S1P61966 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 FO681548.1-201ENST00000455617 1132 ntBASIC15.25■□□□□ 0.03
AP1S1P61966 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.25■□□□□ 0.03
AP1S1P61966 AC104989.1-201ENST00000519711 778 ntBASIC15.25■□□□□ 0.03
AP1S1P61966 AC079316.1-201ENST00000548397 411 ntBASIC15.25■□□□□ 0.03
AP1S1P61966 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.25■□□□□ 0.03
AP1S1P61966 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.25■□□□□ 0.03
AP1S1P61966 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 ECM1P1-201ENST00000604092 1279 ntBASIC15.25■□□□□ 0.03
AP1S1P61966 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 MIR6805-201ENST00000615055 62 ntBASIC15.25■□□□□ 0.03
AP1S1P61966 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
AP1S1P61966 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
AP1S1P61966 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AP1S1P61966 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S1P61966 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP1S1P61966 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 AC006001.1-201ENST00000325130 474 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.24■□□□□ 0.03
AP1S1P61966 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 AL590640.2-201ENST00000457038 527 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S1P61966 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.24■□□□□ 0.03
AP1S1P61966 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.24■□□□□ 0.03
AP1S1P61966 AC078819.1-201ENST00000547454 765 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 AC012085.1-201ENST00000548270 765 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 AP005482.1-201ENST00000563722 1273 ntBASIC15.24■□□□□ 0.03
AP1S1P61966 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S1P61966 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms