Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.48■□□□□ 0.07
CDH4P55283 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 MIR1202-201ENST00000408529 83 ntBASIC15.48■□□□□ 0.07
CDH4P55283 FAM8A4P-201ENST00000435433 1213 ntBASIC15.48■□□□□ 0.07
CDH4P55283 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH4P55283 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 FTLP10-202ENST00000505798 471 ntBASIC15.48■□□□□ 0.07
CDH4P55283 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH4P55283 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.48■□□□□ 0.07
CDH4P55283 AC138466.3-201ENST00000619983 221 ntBASIC15.48■□□□□ 0.07
CDH4P55283 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDH4P55283 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDH4P55283 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH4P55283 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH4P55283 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH4P55283 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.48■□□□□ 0.07
CDH4P55283 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CDH4P55283 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH4P55283 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH4P55283 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH4P55283 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.47■□□□□ 0.07
CDH4P55283 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.47■□□□□ 0.07
CDH4P55283 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 AC023090.2-201ENST00000625182 2110 ntBASIC15.47■□□□□ 0.07
CDH4P55283 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDH4P55283 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CDH4P55283 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDH4P55283 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CDH4P55283 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDH4P55283 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CDH4P55283 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
CDH4P55283 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH4P55283 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 TCAF2P1-201ENST00000291129 2421 ntBASIC15.46■□□□□ 0.07
CDH4P55283 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms