Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN1P35523 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCN1P35523 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN1P35523 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLCN1P35523 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLCN1P35523 ALG1L5P-201ENST00000482043 771 ntBASIC17.36■□□□□ 0.37
CLCN1P35523 AC105233.2-201ENST00000523697 349 ntBASIC17.36■□□□□ 0.37
CLCN1P35523 FAM86C2P-203ENST00000528684 1004 ntBASIC17.36■□□□□ 0.37
CLCN1P35523 AF228730.5-201ENST00000530288 346 ntBASIC17.36■□□□□ 0.37
CLCN1P35523 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCN1P35523 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN1P35523 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 SPTSSB-204ENST00000617024 1292 ntBASIC17.36■□□□□ 0.37
CLCN1P35523 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN1P35523 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCN1P35523 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN1P35523 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN1P35523 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN1P35523 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLCN1P35523 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 MIR346-201ENST00000362234 95 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN1P35523 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 AC142381.1-201ENST00000426099 345 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 HTR5BP-201ENST00000430851 1154 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 SPCS2P4-201ENST00000436160 681 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 MKNK2P1-201ENST00000437526 628 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 AC245100.5-201ENST00000452108 331 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.35■□□□□ 0.37
CLCN1P35523 AC098859.1-201ENST00000502915 1238 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN1P35523 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN1P35523 AC026120.1-201ENST00000611536 926 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN1P35523 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 KRT8P24-201ENST00000560290 1559 ntBASIC17.35■□□□□ 0.37
CLCN1P35523 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN1P35523 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN1P35523 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLCN1P35523 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCN1P35523 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCN1P35523 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms