Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN5O75503 MED15P5-201ENST00000423150 992 ntBASIC12.53□□□□□ -0.4
CLN5O75503 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN5O75503 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.53□□□□□ -0.4
CLN5O75503 FAM86C2P-203ENST00000528684 1004 ntBASIC12.53□□□□□ -0.4
CLN5O75503 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.53□□□□□ -0.4
CLN5O75503 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN5O75503 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.53□□□□□ -0.4
CLN5O75503 AL138918.1-201ENST00000568306 659 ntBASIC12.53□□□□□ -0.4
CLN5O75503 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 BX640515.1-201ENST00000617215 977 ntBASIC12.53□□□□□ -0.4
CLN5O75503 FAM197Y3-203ENST00000618346 717 ntBASIC12.53□□□□□ -0.4
CLN5O75503 AC008267.7-201ENST00000624570 1194 ntBASIC12.53□□□□□ -0.4
CLN5O75503 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CLN5O75503 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLN5O75503 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CLN5O75503 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLN5O75503 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLN5O75503 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLN5O75503 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN5O75503 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CLN5O75503 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.52□□□□□ -0.4
CLN5O75503 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.52□□□□□ -0.4
CLN5O75503 C18orf15-201ENST00000623680 2534 ntBASIC12.52□□□□□ -0.4
CLN5O75503 AGAP7P-201ENST00000582299 2062 ntBASIC12.52□□□□□ -0.4
CLN5O75503 AGAP14-201ENST00000624701 2060 ntBASIC12.52□□□□□ -0.4
CLN5O75503 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN5O75503 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CLN5O75503 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.52□□□□□ -0.41
CLN5O75503 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
CLN5O75503 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 AL671277.1-201ENST00000429656 993 ntBASIC12.52□□□□□ -0.41
CLN5O75503 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN5O75503 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.52□□□□□ -0.41
CLN5O75503 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.52□□□□□ -0.41
CLN5O75503 AC106730.1-201ENST00000566722 1090 ntBASIC12.52□□□□□ -0.41
CLN5O75503 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN5O75503 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN5O75503 AC061975.2-201ENST00000581722 295 ntBASIC12.52□□□□□ -0.41
CLN5O75503 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.52□□□□□ -0.41
CLN5O75503 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN5O75503 AC140113.2-201ENST00000604370 208 ntBASIC12.52□□□□□ -0.41
CLN5O75503 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN5O75503 AC092865.6-201ENST00000642101 219 ntBASIC12.52□□□□□ -0.41
CLN5O75503 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.52□□□□□ -0.41
CLN5O75503 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN5O75503 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN5O75503 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms