Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.72■□□□□ 0.59
SMARCA5O60264 DUX4L47-201ENST00000566374 394 ntBASIC18.72■□□□□ 0.59
SMARCA5O60264 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 MIR5189-201ENST00000577370 114 ntBASIC18.72■□□□□ 0.59
SMARCA5O60264 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SMARCA5O60264 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AP005019.2-201ENST00000615104 511 ntBASIC18.72■□□□□ 0.59
SMARCA5O60264 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 IGHV3-72-202ENST00000621503 303 ntBASIC18.72■□□□□ 0.59
SMARCA5O60264 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCA5O60264 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCA5O60264 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AC055811.4-201ENST00000624039 1754 ntBASIC18.72■□□□□ 0.59
SMARCA5O60264 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SMARCA5O60264 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCA5O60264 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.72■□□□□ 0.59
SMARCA5O60264 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMARCA5O60264 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.72■□□□□ 0.59
SMARCA5O60264 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 INTS4P1-203ENST00000641008 3683 ntBASIC18.71■□□□□ 0.59
SMARCA5O60264 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
SMARCA5O60264 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 NUS1P3-201ENST00000423502 862 ntBASIC18.71■□□□□ 0.59
SMARCA5O60264 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 AC114812.1-204ENST00000449669 728 ntBASIC18.71■□□□□ 0.59
SMARCA5O60264 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 TDH-203ENST00000531764 1110 ntBASIC18.71■□□□□ 0.59
SMARCA5O60264 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
SMARCA5O60264 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMARCA5O60264 AL390755.1-201ENST00000623716 2027 ntBASIC18.71■□□□□ 0.59
SMARCA5O60264 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.71■□□□□ 0.59
SMARCA5O60264 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMARCA5O60264 AC140479.7-201ENST00000636301 2332 ntBASIC18.71■□□□□ 0.58
SMARCA5O60264 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SMARCA5O60264 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.7■□□□□ 0.58
SMARCA5O60264 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC022137.2-201ENST00000503482 481 ntBASIC18.7■□□□□ 0.58
SMARCA5O60264 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.7■□□□□ 0.58
SMARCA5O60264 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.7■□□□□ 0.58
SMARCA5O60264 LINC02084-201ENST00000606069 1096 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms