Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 AC013355.1-201ENST00000562625 723 ntBASIC20.56■□□□□ 0.88
NINLQ9Y2I6 DUX4L46-201ENST00000566845 751 ntBASIC20.56■□□□□ 0.88
NINLQ9Y2I6 AP000346.4-201ENST00000614827 381 ntBASIC20.56■□□□□ 0.88
NINLQ9Y2I6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NINLQ9Y2I6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 AC020910.5-201ENST00000623668 1865 ntBASIC20.55■□□□□ 0.88
NINLQ9Y2I6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 RN7SL769P-201ENST00000469386 295 ntBASIC20.55■□□□□ 0.88
NINLQ9Y2I6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 AC044849.1-201ENST00000519737 1188 ntBASIC20.55■□□□□ 0.88
NINLQ9Y2I6 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 AC006058.4-201ENST00000624016 1670 ntBASIC20.55■□□□□ 0.88
NINLQ9Y2I6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NINLQ9Y2I6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AC016700.1-201ENST00000429424 312 ntBASIC20.54■□□□□ 0.88
NINLQ9Y2I6 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AL451050.2-201ENST00000606967 682 ntBASIC20.54■□□□□ 0.88
NINLQ9Y2I6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NINLQ9Y2I6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AC106794.1-201ENST00000506935 792 ntBASIC20.53■□□□□ 0.88
NINLQ9Y2I6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.53■□□□□ 0.88
NINLQ9Y2I6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.53■□□□□ 0.88
NINLQ9Y2I6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms