Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC003686.1-201ENST00000550956 1034 ntBASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC025271.4-201ENST00000621477 1726 ntBASIC21.32■■□□□ 1
SLC52A1Q9NWF4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 AC092850.2-201ENST00000623821 2697 ntBASIC21.32■■□□□ 1
SLC52A1Q9NWF4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC52A1Q9NWF4 PCDHB19P-201ENST00000570871 2371 ntBASIC21.31■■□□□ 1
SLC52A1Q9NWF4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 HNRNPA1P27-201ENST00000412087 955 ntBASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AC097065.1-201ENST00000425737 517 ntBASIC21.31■■□□□ 1
SLC52A1Q9NWF4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AC025262.2-201ENST00000623975 1056 ntBASIC21.31■■□□□ 1
SLC52A1Q9NWF4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 PRORSD1P-202ENST00000563365 2154 ntBASIC21.31■■□□□ 1
SLC52A1Q9NWF4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC21.31■■□□□ 1
SLC52A1Q9NWF4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 AL807761.2-201ENST00000422849 729 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 FTH1P22-201ENST00000456305 520 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 RN7SL81P-201ENST00000493781 261 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 TMCO5B-205ENST00000530020 894 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 MROH4P-201ENST00000431302 1578 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.3■■□□□ 1
SLC52A1Q9NWF4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SLC52A1Q9NWF4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 RNA5SP359-201ENST00000364838 113 ntBASIC21.29■■□□□ 1
SLC52A1Q9NWF4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 AC087392.5-201ENST00000612517 489 ntBASIC21.29■■□□□ 1
SLC52A1Q9NWF4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 AP001184.1-201ENST00000637936 376 ntBASIC21.29■■□□□ 1
SLC52A1Q9NWF4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SLC52A1Q9NWF4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms