Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC007191.1-201ENST00000623179 2995 ntBASIC14.55□□□□□ -0.08
BRF2Q9HAW0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AL009178.2-201ENST00000597278 2719 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AC087499.6-201ENST00000411576 835 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 SOCS2P1-201ENST00000417727 557 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 FAM207CP-201ENST00000443486 507 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 UGT1A2P-201ENST00000454886 866 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AC092552.1-201ENST00000547243 906 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 DUX4L47-201ENST00000566374 394 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AC124283.3-201ENST00000570869 594 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 TMEM261P1-201ENST00000604899 340 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MIR8072-201ENST00000614241 80 ntBASIC14.54□□□□□ -0.08
BRF2Q9HAW0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
BRF2Q9HAW0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC005912.2-201ENST00000619492 2400 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC023090.2-201ENST00000625182 2110 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC113367.3-201ENST00000508316 1912 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 MIR770-201ENST00000390219 98 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC114812.1-204ENST00000449669 728 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC123567.1-201ENST00000548294 1261 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 MYO15B-237ENST00000642007 4893 ntBASIC14.53□□□□□ -0.08
BRF2Q9HAW0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms