Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 BX322534.1-201ENST00000635574 241 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 AC215524.1-201ENST00000635696 241 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 AC069061.4-201ENST00000581294 1347 ntBASIC14.92□□□□□ -0.02
COL25A1Q9BXS0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC007952.5-201ENST00000572818 1486 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AP000244.1-201ENST00000424582 201 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC092903.1-201ENST00000466506 262 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 RN7SL564P-201ENST00000496309 250 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC087203.1-201ENST00000532111 1181 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 BX322562.1-201ENST00000617004 561 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 AC124944.3-201ENST00000607976 1304 ntBASIC14.91□□□□□ -0.02
COL25A1Q9BXS0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 AL359092.2-201ENST00000423330 585 ntBASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.9□□□□□ -0.02
COL25A1Q9BXS0 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms