Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AF228730.6-201ENST00000641497 218 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC084121.3-201ENST00000641716 218 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AL157414.3-201ENST00000624276 1954 ntBASIC14.85□□□□□ -0.03
EBF4Q9BQW3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
EBF4Q9BQW3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AC016397.2-201ENST00000624848 1985 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AC130686.1-201ENST00000622936 2466 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 SLC25A1P1-201ENST00000528351 927 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 RN7SL828P-201ENST00000607615 303 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 Z97205.2-201ENST00000564697 1639 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ZNF259P1-201ENST00000407656 1365 ntBASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EBF4Q9BQW3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
EBF4Q9BQW3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AL591424.1-201ENST00000442569 1213 ntBASIC14.83□□□□□ -0.04
EBF4Q9BQW3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AC027601.4-201ENST00000611259 610 ntBASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AC003101.2-201ENST00000612557 442 ntBASIC14.83□□□□□ -0.04
EBF4Q9BQW3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AC012617.1-204ENST00000586340 2305 ntBASIC14.83□□□□□ -0.04
EBF4Q9BQW3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms