Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ACTBP8-201ENST00000403258 1108 ntBASIC13.7□□□□□ -0.22
CPNE4Q96A23 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 USP32P1-208ENST00000506594 1164 ntBASIC13.7□□□□□ -0.22
CPNE4Q96A23 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 BTNL10-201ENST00000595971 695 ntBASIC13.7□□□□□ -0.22
CPNE4Q96A23 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.7□□□□□ -0.22
CPNE4Q96A23 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 AC023024.2-201ENST00000623561 1993 ntBASIC13.7□□□□□ -0.22
CPNE4Q96A23 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.7□□□□□ -0.22
CPNE4Q96A23 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE4Q96A23 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 RNU1-114P-201ENST00000365297 166 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 AL139094.1-201ENST00000405549 1188 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 KLF2P2-201ENST00000416807 1039 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 TMEM14DP-201ENST00000422205 345 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 SLC25A47P1-201ENST00000531577 414 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 AL162274.1-201ENST00000617191 1098 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 AL603764.1-201ENST00000636452 321 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 KRT8P14-201ENST00000414254 1442 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CPNE4Q96A23 PPT1-215ENST00000641471 2368 ntBASIC13.69□□□□□ -0.22
CPNE4Q96A23 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE4Q96A23 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms