Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 ELL2P2-201ENST00000515135 694 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC132938.2-201ENST00000579188 680 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC008507.2-201ENST00000588402 1176 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC093726.1-201ENST00000608064 963 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 WFDC1-204ENST00000613603 549 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AC109809.1-201ENST00000619665 545 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AL591163.1-201ENST00000641757 987 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 AP000845.1-201ENST00000581677 2131 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 ACE3P-201ENST00000423435 1973 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PTCD2Q8WV60 REXO1L4P-201ENST00000605109 1937 ntBASIC15.53■□□□□ 0.08
PTCD2Q8WV60 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AL121949.1-201ENST00000402043 968 ntBASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 RN7SL399P-201ENST00000471648 279 ntBASIC15.52■□□□□ 0.08
PTCD2Q8WV60 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AL158211.1-201ENST00000566763 763 ntBASIC15.52■□□□□ 0.08
PTCD2Q8WV60 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 AC112187.3-201ENST00000607844 408 ntBASIC15.52■□□□□ 0.08
PTCD2Q8WV60 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 METTL15-211ENST00000634762 718 ntTSL 5 BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 CICP23-201ENST00000605013 2741 ntBASIC15.52■□□□□ 0.08
PTCD2Q8WV60 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PTCD2Q8WV60 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 AJ011931.1-201ENST00000618749 2492 ntBASIC15.52■□□□□ 0.07
PTCD2Q8WV60 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 AC104581.4-201ENST00000623126 3052 ntBASIC15.52■□□□□ 0.07
PTCD2Q8WV60 CICP24-201ENST00000605464 2705 ntBASIC15.52■□□□□ 0.07
PTCD2Q8WV60 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PTCD2Q8WV60 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTCD2Q8WV60 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms