Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.58■■□□□ 1.04
POLR1AO95602 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR1AO95602 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.57■■□□□ 1.04
POLR1AO95602 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 AC091951.1-201ENST00000512854 2465 ntBASIC21.57■■□□□ 1.04
POLR1AO95602 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
POLR1AO95602 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 RN7SL81P-201ENST00000493781 261 ntBASIC21.57■■□□□ 1.04
POLR1AO95602 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.57■■□□□ 1.04
POLR1AO95602 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.57■■□□□ 1.04
POLR1AO95602 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
POLR1AO95602 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 AP000845.1-201ENST00000581677 2131 ntBASIC21.57■■□□□ 1.04
POLR1AO95602 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1AO95602 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR1AO95602 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR1AO95602 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
POLR1AO95602 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1AO95602 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR1AO95602 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
POLR1AO95602 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1AO95602 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1AO95602 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR1AO95602 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
POLR1AO95602 AC107464.3-201ENST00000609172 737 ntBASIC21.56■■□□□ 1.04
POLR1AO95602 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR1AO95602 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1AO95602 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
POLR1AO95602 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1AO95602 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
POLR1AO95602 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 RN7SL596P-201ENST00000582123 288 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 AC103810.10-201ENST00000606504 343 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.55■■□□□ 1.04
POLR1AO95602 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 FRMPD2B-201ENST00000431305 1347 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
POLR1AO95602 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR1AO95602 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR1AO95602 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
POLR1AO95602 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 PUDPP3-201ENST00000445368 636 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 ORAOV1P1-201ENST00000503108 395 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1AO95602 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1AO95602 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC21.55■■□□□ 1.04
POLR1AO95602 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR1AO95602 AP001527.2-201ENST00000614441 631 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 AC009093.2-202ENST00000620513 2079 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1AO95602 ZBED1P1-201ENST00000502364 1930 ntBASIC21.55■■□□□ 1.04
POLR1AO95602 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 GSN-215ENST00000545652 2428 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms