Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 MIR4783-201ENST00000580343 82 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AC005324.6-201ENST00000587972 613 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 AC068587.10-201ENST00000641210 219 ntBASIC13.24□□□□□ -0.29
MBD3L3A6NE82 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MBD3L3A6NE82 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 IGHJ2P-201ENST00000454480 60 ntBASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC013355.1-201ENST00000562625 723 ntBASIC13.23□□□□□ -0.29
MBD3L3A6NE82 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 RN7SL163P-201ENST00000583100 276 ntBASIC13.23□□□□□ -0.29
MBD3L3A6NE82 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC006058.4-201ENST00000624016 1670 ntBASIC13.23□□□□□ -0.29
MBD3L3A6NE82 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MBD3L3A6NE82 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 E2F3P2-201ENST00000447755 1422 ntBASIC13.22□□□□□ -0.29
MBD3L3A6NE82 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 SALL4P5-201ENST00000419001 1760 ntBASIC13.22□□□□□ -0.29
MBD3L3A6NE82 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 RNMTL1P1-201ENST00000454103 560 ntBASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.22□□□□□ -0.29
MBD3L3A6NE82 AC132192.2-201ENST00000596206 1147 ntBASIC13.22□□□□□ -0.29
MBD3L3A6NE82 BX088702.1-201ENST00000610784 235 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms