Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC112482.1-201ENST00000492080 688 ntBASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 AL133215.2-201ENST00000609242 977 ntBASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF103-CHMP3A0A140T963 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC211486.1-202ENST00000416371 468 ntBASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 HIST3H2BA-201ENST00000436555 524 ntBASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC211476.1-201ENST00000503899 468 ntBASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF103-CHMP3A0A140T963 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC027601.5-201ENST00000624065 2482 ntBASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 KRT8P12-202ENST00000472924 1397 ntBASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 FAM8A3P-201ENST00000427218 844 ntBASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 MIR4453-201ENST00000584019 89 ntBASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF103-CHMP3A0A140T963 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms