Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MEIS3P1-201ENST00000495167 958 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TPRX2P-201ENST00000535362 881 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SRD5A3P1-201ENST00000603021 949 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 AL008721.1-201ENST00000609964 604 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AC004461.2-201ENST00000629517 803 ntBASIC10.2□□□□□ -0.78
SCXQ7RTU7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SCXQ7RTU7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SCXQ7RTU7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AL603832.2-201ENST00000566195 2125 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 INE1-201ENST00000456273 945 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 MIR4321-201ENST00000592276 80 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AC023157.3-201ENST00000619086 2088 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 AL596087.1-201ENST00000400979 1969 ntBASIC10.19□□□□□ -0.78
SCXQ7RTU7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
SCXQ7RTU7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SCXQ7RTU7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms