Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.65■□□□□ 0.1
ALFQ53S48 SNX29P1-201ENST00000548357 1007 ntBASIC15.65■□□□□ 0.1
ALFQ53S48 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.65■□□□□ 0.1
ALFQ53S48 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.65■□□□□ 0.1
ALFQ53S48 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.65■□□□□ 0.1
ALFQ53S48 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.65■□□□□ 0.1
ALFQ53S48 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
ALFQ53S48 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ALFQ53S48 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.65■□□□□ 0.1
ALFQ53S48 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ALFQ53S48 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ALFQ53S48 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ALFQ53S48 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ALFQ53S48 AGAP7P-201ENST00000582299 2062 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 AGAP14-201ENST00000624701 2060 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 PDIA3P1-201ENST00000471856 1510 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 OR8S1-201ENST00000310194 1080 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 ANKRD19P-201ENST00000338192 862 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.64■□□□□ 0.09
ALFQ53S48 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 GK-202ENST00000378941 458 ntTSL 3 BASIC15.64■□□□□ 0.09
ALFQ53S48 MIR1909-201ENST00000411312 80 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 ARSEP1-201ENST00000420443 635 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 KRT43P-201ENST00000434019 910 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 AC007551.1-201ENST00000457394 519 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 AC025279.2-201ENST00000569730 653 ntBASIC15.64■□□□□ 0.09
ALFQ53S48 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ALFQ53S48 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.64■□□□□ 0.09
ALFQ53S48 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ALFQ53S48 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ALFQ53S48 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ALFQ53S48 LILRP1-201ENST00000444199 1370 ntBASIC15.63■□□□□ 0.09
ALFQ53S48 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ALFQ53S48 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
ALFQ53S48 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.63■□□□□ 0.09
ALFQ53S48 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.63■□□□□ 0.09
ALFQ53S48 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
ALFQ53S48 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
ALFQ53S48 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 AC022616.1-201ENST00000518688 554 ntBASIC15.63■□□□□ 0.09
ALFQ53S48 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.63■□□□□ 0.09
ALFQ53S48 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ALFQ53S48 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms