Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RIPK4P57078 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.87■□□□□ 0.77
RIPK4P57078 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.87■□□□□ 0.77
RIPK4P57078 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.87■□□□□ 0.77
RIPK4P57078 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.87■□□□□ 0.77
RIPK4P57078 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.87■□□□□ 0.77
RIPK4P57078 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.87■□□□□ 0.77
RIPK4P57078 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 TCAF2P1-201ENST00000291129 2421 ntBASIC19.87■□□□□ 0.77
RIPK4P57078 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.87■□□□□ 0.77
RIPK4P57078 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.87■□□□□ 0.77
RIPK4P57078 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.87■□□□□ 0.77
RIPK4P57078 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.87■□□□□ 0.77
RIPK4P57078 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RIPK4P57078 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK4P57078 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK4P57078 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 CLUHP2-201ENST00000426660 1303 ntBASIC19.86■□□□□ 0.77
RIPK4P57078 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK4P57078 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.86■□□□□ 0.77
RIPK4P57078 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RIPK4P57078 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RIPK4P57078 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.86■□□□□ 0.77
RIPK4P57078 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.86■□□□□ 0.77
RIPK4P57078 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.86■□□□□ 0.77
RIPK4P57078 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.86■□□□□ 0.77
RIPK4P57078 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RIPK4P57078 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.86■□□□□ 0.77
RIPK4P57078 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RIPK4P57078 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.85■□□□□ 0.77
RIPK4P57078 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RIPK4P57078 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RIPK4P57078 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RIPK4P57078 MIR1202-201ENST00000408529 83 ntBASIC19.85■□□□□ 0.77
RIPK4P57078 CD8B2-202ENST00000417670 633 ntBASIC19.85■□□□□ 0.77
RIPK4P57078 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.85■□□□□ 0.77
RIPK4P57078 RPS2P32-201ENST00000439199 892 ntBASIC19.85■□□□□ 0.77
RIPK4P57078 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
RIPK4P57078 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.85■□□□□ 0.77
RIPK4P57078 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.85■□□□□ 0.77
RIPK4P57078 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 AC023090.2-201ENST00000625182 2110 ntBASIC19.85■□□□□ 0.77
RIPK4P57078 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RIPK4P57078 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RIPK4P57078 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.84■□□□□ 0.77
RIPK4P57078 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RIPK4P57078 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RIPK4P57078 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC19.84■□□□□ 0.77
RIPK4P57078 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms