Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 AC073439.1-201ENST00000624121 1774 ntBASIC12.3□□□□□ -0.44
RAB5CP51148 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 AC012508.2-201ENST00000567613 1472 ntBASIC12.3□□□□□ -0.44
RAB5CP51148 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
RAB5CP51148 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 AL596275.1-201ENST00000423464 877 ntBASIC12.3□□□□□ -0.44
RAB5CP51148 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 DRAXINP1-201ENST00000437611 948 ntBASIC12.3□□□□□ -0.44
RAB5CP51148 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB5CP51148 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 MIR5100-201ENST00000579544 119 ntBASIC12.3□□□□□ -0.44
RAB5CP51148 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.3□□□□□ -0.44
RAB5CP51148 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.3□□□□□ -0.44
RAB5CP51148 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
RAB5CP51148 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
RAB5CP51148 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RAB5CP51148 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RAB5CP51148 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
RAB5CP51148 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.29□□□□□ -0.44
RAB5CP51148 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 TCAM1P-207ENST00000485295 1537 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
RAB5CP51148 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.29□□□□□ -0.44
RAB5CP51148 HMGA1P7-201ENST00000406908 502 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 KRT18P31-201ENST00000506277 1292 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.29□□□□□ -0.44
RAB5CP51148 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.29□□□□□ -0.44
RAB5CP51148 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
RAB5CP51148 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
RAB5CP51148 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms