Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 BEND3P1-201ENST00000421591 1944 ntBASIC14.88□□□□□ -0.03
EPHA3P29320 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.88□□□□□ -0.03
EPHA3P29320 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
EPHA3P29320 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EPHA3P29320 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EPHA3P29320 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA3P29320 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
EPHA3P29320 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 AC067750.1-201ENST00000608826 6545 ntBASIC14.87□□□□□ -0.03
EPHA3P29320 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 FDX1P1-201ENST00000449115 551 ntBASIC14.87□□□□□ -0.03
EPHA3P29320 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA3P29320 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
EPHA3P29320 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.87□□□□□ -0.03
EPHA3P29320 AC007967.4-201ENST00000614700 386 ntBASIC14.87□□□□□ -0.03
EPHA3P29320 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 Z97205.2-201ENST00000564697 1639 ntBASIC14.87□□□□□ -0.03
EPHA3P29320 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
EPHA3P29320 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.87□□□□□ -0.03
EPHA3P29320 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
EPHA3P29320 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EPHA3P29320 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 LILRP1-201ENST00000444199 1370 ntBASIC14.86□□□□□ -0.03
EPHA3P29320 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.86□□□□□ -0.03
EPHA3P29320 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.86□□□□□ -0.03
EPHA3P29320 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.86□□□□□ -0.03
EPHA3P29320 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.86□□□□□ -0.03
EPHA3P29320 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EPHA3P29320 AF228730.6-201ENST00000641497 218 ntBASIC14.86□□□□□ -0.03
EPHA3P29320 AC084121.3-201ENST00000641716 218 ntBASIC14.86□□□□□ -0.03
EPHA3P29320 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EPHA3P29320 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms