Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.06■□□□□ 0
PDGFBP01127 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.06■□□□□ 0
PDGFBP01127 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.06■□□□□ 0
PDGFBP01127 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.06■□□□□ 0
PDGFBP01127 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 AP000911.2-201ENST00000534330 502 ntBASIC15.06■□□□□ 0
PDGFBP01127 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 MIR4472-1-201ENST00000584349 80 ntBASIC15.06■□□□□ 0
PDGFBP01127 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
PDGFBP01127 MME-218ENST00000625667 363 ntTSL 5 BASIC15.06■□□□□ 0
PDGFBP01127 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDGFBP01127 AL137783.1-201ENST00000623494 1896 ntBASIC15.06■□□□□ 0
PDGFBP01127 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDGFBP01127 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.05■□□□□ 0
PDGFBP01127 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PDGFBP01127 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PDGFBP01127 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PDGFBP01127 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
PDGFBP01127 COX20P1-201ENST00000366529 357 ntBASIC15.05■□□□□ -0
PDGFBP01127 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.05■□□□□ -0
PDGFBP01127 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.05■□□□□ -0
PDGFBP01127 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.05■□□□□ -0
PDGFBP01127 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.05■□□□□ -0
PDGFBP01127 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.05■□□□□ -0
PDGFBP01127 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.05■□□□□ -0
PDGFBP01127 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.05■□□□□ -0
PDGFBP01127 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.05■□□□□ -0
PDGFBP01127 AC008825.2-201ENST00000603374 718 ntBASIC15.05■□□□□ -0
PDGFBP01127 AC009560.1-201ENST00000620208 434 ntBASIC15.05■□□□□ -0
PDGFBP01127 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.05■□□□□ -0
PDGFBP01127 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
PDGFBP01127 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
PDGFBP01127 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.05■□□□□ -0
PDGFBP01127 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.05■□□□□ -0
PDGFBP01127 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.05■□□□□ -0
PDGFBP01127 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PDGFBP01127 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 AL360270.3-201ENST00000609118 1348 ntBASIC15.04■□□□□ -0
PDGFBP01127 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PDGFBP01127 AL357373.1-201ENST00000394974 322 ntBASIC15.04■□□□□ -0
PDGFBP01127 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 AQP7P5-201ENST00000428759 1049 ntBASIC15.04■□□□□ -0
PDGFBP01127 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 TSPY25P-201ENST00000429463 745 ntBASIC15.04■□□□□ -0
PDGFBP01127 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.04■□□□□ -0
PDGFBP01127 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 AQP7P4-201ENST00000447083 1042 ntBASIC15.04■□□□□ -0
PDGFBP01127 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.04■□□□□ -0
PDGFBP01127 AQP7P2-201ENST00000453967 1041 ntBASIC15.04■□□□□ -0
PDGFBP01127 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.04■□□□□ -0
PDGFBP01127 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.04■□□□□ -0
PDGFBP01127 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.04■□□□□ -0
PDGFBP01127 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms