Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL157407.1-201ENST00000435784 904 ntBASIC22.14■■□□□ 1.13
HFM1A2PYH4 KRT8P13-201ENST00000463294 1010 ntBASIC22.14■■□□□ 1.13
HFM1A2PYH4 AC044849.1-201ENST00000519737 1188 ntBASIC22.14■■□□□ 1.13
HFM1A2PYH4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HFM1A2PYH4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 PCBP2-OT1-201ENST00000634357 590 ntBASIC22.14■■□□□ 1.13
HFM1A2PYH4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC22.14■■□□□ 1.13
HFM1A2PYH4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC22.13■■□□□ 1.13
HFM1A2PYH4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 VDAC1P1-201ENST00000439229 848 ntBASIC22.13■■□□□ 1.13
HFM1A2PYH4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 AC013355.1-201ENST00000562625 723 ntBASIC22.13■■□□□ 1.13
HFM1A2PYH4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 AP000346.4-201ENST00000614827 381 ntBASIC22.13■■□□□ 1.13
HFM1A2PYH4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HFM1A2PYH4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
HFM1A2PYH4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 MRPL37P1-201ENST00000592451 1337 ntBASIC22.12■■□□□ 1.13
HFM1A2PYH4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 AC103988.2-201ENST00000561804 725 ntBASIC22.12■■□□□ 1.13
HFM1A2PYH4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC22.12■■□□□ 1.13
HFM1A2PYH4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HFM1A2PYH4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 BX284668.4-201ENST00000453917 508 ntBASIC22.11■■□□□ 1.13
HFM1A2PYH4 AL451050.2-201ENST00000606967 682 ntBASIC22.11■■□□□ 1.13
HFM1A2PYH4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HFM1A2PYH4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC22.11■■□□□ 1.13
HFM1A2PYH4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HFM1A2PYH4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC22.1■■□□□ 1.13
HFM1A2PYH4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms