Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 PCDHGB8P-201ENST00000502926 1973 ntBASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CDC42BPBQ9Y5S2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AC026471.1-201ENST00000564629 3026 ntBASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 CR383656.3-201ENST00000551315 183 ntBASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC22.31■■□□□ 1.16
CDC42BPBQ9Y5S2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 AC004837.1-201ENST00000446267 564 ntBASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 AC007952.4-201ENST00000573866 637 ntBASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPBQ9Y5S2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 RN7SL277P-201ENST00000481521 288 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 MIR3180-2-201ENST00000581748 88 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 API5-203ENST00000455725 2257 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 WASH3P-207ENST00000560956 1394 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 SSR4P1-203ENST00000599569 2260 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 LINC01101-201ENST00000622953 1884 ntBASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 F10-203ENST00000409306 1450 ntTSL 3 BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPBQ9Y5S2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 AC234644.1-201ENST00000406065 370 ntBASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 MIR1227-201ENST00000408484 88 ntBASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 AL022344.2-201ENST00000568976 968 ntBASIC22.28■■□□□ 1.16
CDC42BPBQ9Y5S2 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms