Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 AC022137.2-201ENST00000503482 481 ntBASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SNX29P1-201ENST00000548357 1007 ntBASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 LINC00528-201ENST00000600723 2160 ntBASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
COL4A3BPQ9Y5P4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 AC007787.1-201ENST00000588095 1583 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 MIR6752-201ENST00000618442 71 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 BX539320.1-201ENST00000623759 877 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 CICP24-201ENST00000605464 2705 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 ZBED1P1-201ENST00000502364 1930 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 REXO1L4P-201ENST00000605109 1937 ntBASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL4A3BPQ9Y5P4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL4A3BPQ9Y5P4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms