Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MIR1908-201ENST00000410394 80 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 AC114812.1-204ENST00000449669 728 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 RN7SL190P-201ENST00000582519 257 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 AGAP7P-201ENST00000582299 2062 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 AGAP14-201ENST00000624701 2060 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
RAI2Q9Y5P3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AL139094.1-201ENST00000405549 1188 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 KLF2P2-201ENST00000416807 1039 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 HLA-K-203ENST00000430151 1046 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AC022137.2-201ENST00000503482 481 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AC104989.1-201ENST00000519711 778 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 PTP4A1P2-201ENST00000546033 454 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AC008735.3-201ENST00000596646 500 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 MSTO2P-201ENST00000314835 1709 ntBASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAI2Q9Y5P3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 ZBED1P1-201ENST00000502364 1930 ntBASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI2Q9Y5P3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms