Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AL590640.2-201ENST00000457038 527 ntBASIC14.02□□□□□ -0.17
LRFN1Q9P244 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 DUX4L45-201ENST00000566406 1057 ntBASIC14.02□□□□□ -0.17
LRFN1Q9P244 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AC009542.2-202ENST00000619004 1067 ntBASIC14.02□□□□□ -0.17
LRFN1Q9P244 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.02□□□□□ -0.17
LRFN1Q9P244 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRFN1Q9P244 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.02□□□□□ -0.17
LRFN1Q9P244 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MIR1202-201ENST00000408529 83 ntBASIC14.01□□□□□ -0.17
LRFN1Q9P244 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 RN7SL560P-201ENST00000577943 264 ntBASIC14.01□□□□□ -0.17
LRFN1Q9P244 MIR4538-201ENST00000581377 78 ntBASIC14.01□□□□□ -0.17
LRFN1Q9P244 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 AC006453.4-201ENST00000636949 1252 ntBASIC14.01□□□□□ -0.17
LRFN1Q9P244 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRFN1Q9P244 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRFN1Q9P244 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14□□□□□ -0.17
LRFN1Q9P244 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRFN1Q9P244 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 CD8B2-202ENST00000417670 633 ntBASIC14□□□□□ -0.17
LRFN1Q9P244 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms