Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AP005482.1-201ENST00000563722 1273 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 BTNL10-201ENST00000595971 695 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 AL391069.4-201ENST00000609583 481 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 AC133552.6-201ENST00000613406 534 ntBASIC18.16■□□□□ 0.5
DDX11Q96FC9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DDX11Q96FC9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DDX11Q96FC9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 KRT43P-201ENST00000434019 910 ntBASIC18.15■□□□□ 0.5
DDX11Q96FC9 AL162726.2-201ENST00000438986 1017 ntBASIC18.15■□□□□ 0.5
DDX11Q96FC9 FAM86LP-201ENST00000478302 853 ntBASIC18.15■□□□□ 0.5
DDX11Q96FC9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 CU634019.7-201ENST00000624153 1185 ntBASIC18.15■□□□□ 0.5
DDX11Q96FC9 FP236241.2-201ENST00000624906 1185 ntBASIC18.15■□□□□ 0.5
DDX11Q96FC9 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX11Q96FC9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX11Q96FC9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.14■□□□□ 0.5
DDX11Q96FC9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX11Q96FC9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX11Q96FC9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX11Q96FC9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
DDX11Q96FC9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 BOLA2P3-201ENST00000404566 256 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 KRT223P-202ENST00000449164 1292 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 CROCCP4-201ENST00000457096 498 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 AC015910.1-201ENST00000579400 975 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 MIR4259-201ENST00000584466 101 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 MIR6775-201ENST00000617557 69 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.14■□□□□ 0.49
DDX11Q96FC9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms