Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 AC134312.5-201ENST00000568031 1313 ntBASIC16.15■□□□□ 0.18
UBA3Q8TBC4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBA3Q8TBC4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
UBA3Q8TBC4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
UBA3Q8TBC4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AL596257.1-201ENST00000641463 2694 ntBASIC16.14■□□□□ 0.17
UBA3Q8TBC4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AL137783.1-201ENST00000623494 1896 ntBASIC16.14■□□□□ 0.17
UBA3Q8TBC4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 BAATP1-201ENST00000412284 1225 ntBASIC16.14■□□□□ 0.17
UBA3Q8TBC4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AC114812.1-204ENST00000449669 728 ntBASIC16.14■□□□□ 0.17
UBA3Q8TBC4 KRT17P7-201ENST00000451704 1104 ntBASIC16.14■□□□□ 0.17
UBA3Q8TBC4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBA3Q8TBC4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 LILRP1-201ENST00000444199 1370 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AC005034.1-201ENST00000426657 489 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 GIMAP3P-201ENST00000495150 836 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AC022137.2-201ENST00000503482 481 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AC068587.3-201ENST00000526613 355 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SLC25A47P1-201ENST00000531577 414 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 PTP4A1P2-201ENST00000546033 454 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AC008735.3-201ENST00000596646 500 ntBASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBA3Q8TBC4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms