Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC131212.3-201ENST00000624087 4219 ntBASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CROCCP3Q8IVE0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AP002383.4-201ENST00000442518 975 ntBASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC243562.2-201ENST00000561247 970 ntBASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MTDHP4-201ENST00000600287 670 ntBASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC006504.4-201ENST00000592118 1568 ntBASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AC005332.1-201ENST00000577698 1310 ntBASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.87□□□□□ -0.19
CROCCP3Q8IVE0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms