Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.39□□□□□ -0.11
SMSP52788 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SMSP52788 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.39□□□□□ -0.11
SMSP52788 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.39□□□□□ -0.11
SMSP52788 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.39□□□□□ -0.11
SMSP52788 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMSP52788 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
SMSP52788 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMSP52788 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SMSP52788 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMSP52788 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMSP52788 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.38□□□□□ -0.11
SMSP52788 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 AC023024.2-201ENST00000623561 1993 ntBASIC14.38□□□□□ -0.11
SMSP52788 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 AC023908.3-201ENST00000564211 3047 ntBASIC14.38□□□□□ -0.11
SMSP52788 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 AL390755.1-201ENST00000623716 2027 ntBASIC14.38□□□□□ -0.11
SMSP52788 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.38□□□□□ -0.11
SMSP52788 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 AC079776.1-201ENST00000401540 1152 ntBASIC14.38□□□□□ -0.11
SMSP52788 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SMSP52788 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.38□□□□□ -0.11
SMSP52788 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.38□□□□□ -0.11
SMSP52788 AC007389.4-201ENST00000454674 793 ntBASIC14.38□□□□□ -0.11
SMSP52788 AL139010.1-201ENST00000454878 894 ntBASIC14.38□□□□□ -0.11
SMSP52788 RN7SL837P-201ENST00000463010 287 ntBASIC14.38□□□□□ -0.11
SMSP52788 AC104596.2-201ENST00000512793 793 ntBASIC14.38□□□□□ -0.11
SMSP52788 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.38□□□□□ -0.11
SMSP52788 TIMM17BP1-201ENST00000545713 516 ntBASIC14.38□□□□□ -0.11
SMSP52788 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.38□□□□□ -0.11
SMSP52788 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.38□□□□□ -0.11
SMSP52788 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 AC004461.2-201ENST00000629517 803 ntBASIC14.38□□□□□ -0.11
SMSP52788 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
SMSP52788 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SMSP52788 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMSP52788 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 AC232323.1-201ENST00000540724 2099 ntBASIC14.37□□□□□ -0.11
SMSP52788 REXO1L5P-201ENST00000622260 2098 ntBASIC14.37□□□□□ -0.11
SMSP52788 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
SMSP52788 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SMSP52788 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.37□□□□□ -0.11
SMSP52788 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
SMSP52788 AC022210.1-201ENST00000449856 793 ntBASIC14.37□□□□□ -0.11
SMSP52788 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 AP005482.1-201ENST00000563722 1273 ntBASIC14.37□□□□□ -0.11
SMSP52788 RRP7BP-205ENST00000566851 833 ntBASIC14.37□□□□□ -0.11
SMSP52788 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms