Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.54■□□□□ 0.88
ATF3P18847 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATF3P18847 RNA5SP359-201ENST00000364838 113 ntBASIC20.54■□□□□ 0.88
ATF3P18847 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.54■□□□□ 0.88
ATF3P18847 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ATF3P18847 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.54■□□□□ 0.88
ATF3P18847 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.54■□□□□ 0.88
ATF3P18847 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.54■□□□□ 0.88
ATF3P18847 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.54■□□□□ 0.88
ATF3P18847 AC005041.3-201ENST00000606287 649 ntBASIC20.54■□□□□ 0.88
ATF3P18847 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.54■□□□□ 0.88
ATF3P18847 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
ATF3P18847 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ATF3P18847 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATF3P18847 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 AC018629.1-201ENST00000623381 1736 ntBASIC20.53■□□□□ 0.88
ATF3P18847 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATF3P18847 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.53■□□□□ 0.88
ATF3P18847 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 EIF5AP2-201ENST00000585668 1047 ntBASIC20.53■□□□□ 0.88
ATF3P18847 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.53■□□□□ 0.88
ATF3P18847 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
ATF3P18847 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.53■□□□□ 0.88
ATF3P18847 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATF3P18847 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.53■□□□□ 0.88
ATF3P18847 AGGF1P2-201ENST00000426656 2106 ntBASIC20.53■□□□□ 0.88
ATF3P18847 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ATF3P18847 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATF3P18847 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATF3P18847 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.52■□□□□ 0.88
ATF3P18847 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ATF3P18847 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.52■□□□□ 0.88
ATF3P18847 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.52■□□□□ 0.88
ATF3P18847 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.52■□□□□ 0.88
ATF3P18847 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
ATF3P18847 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.52■□□□□ 0.88
ATF3P18847 AC018695.6-201ENST00000614011 534 ntBASIC20.52■□□□□ 0.88
ATF3P18847 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
ATF3P18847 AC002472.4-201ENST00000641915 272 ntBASIC20.52■□□□□ 0.88
ATF3P18847 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.52■□□□□ 0.88
ATF3P18847 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATF3P18847 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.52■□□□□ 0.87
ATF3P18847 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATF3P18847 LINC01815-202ENST00000641468 1409 ntBASIC20.52■□□□□ 0.87
ATF3P18847 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATF3P18847 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.52■□□□□ 0.87
ATF3P18847 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATF3P18847 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATF3P18847 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATF3P18847 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC20.51■□□□□ 0.87
ATF3P18847 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
ATF3P18847 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.51■□□□□ 0.87
ATF3P18847 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATF3P18847 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.51■□□□□ 0.87
ATF3P18847 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms