Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HNRNPUP1-201ENST00000554987 333 ntBASIC11.98□□□□□ -0.49
ZNF253O75346 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 AP000842.3-202ENST00000569238 1080 ntBASIC11.98□□□□□ -0.49
ZNF253O75346 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC11.98□□□□□ -0.49
ZNF253O75346 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ZNF253O75346 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 AC136759.1-202ENST00000530858 2194 ntBASIC11.98□□□□□ -0.49
ZNF253O75346 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ZNF253O75346 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.97□□□□□ -0.49
ZNF253O75346 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ZNF253O75346 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.97□□□□□ -0.49
ZNF253O75346 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 ZNF259P1-201ENST00000407656 1365 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 WASH3P-207ENST00000560956 1394 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 FO538757.1-201ENST00000623083 1397 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 AC007967.2-201ENST00000432613 625 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.97□□□□□ -0.49
ZNF253O75346 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.97□□□□□ -0.49
ZNF253O75346 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.97□□□□□ -0.49
ZNF253O75346 AC097359.3-201ENST00000603982 1210 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 AL513190.1-201ENST00000621254 727 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ZNF253O75346 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 AC027601.5-201ENST00000624065 2482 ntBASIC11.97□□□□□ -0.49
ZNF253O75346 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
ZNF253O75346 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
ZNF253O75346 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ZNF253O75346 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZNF253O75346 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ZNF253O75346 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ZNF253O75346 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZNF253O75346 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.96□□□□□ -0.49
ZNF253O75346 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.96□□□□□ -0.49
ZNF253O75346 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ZNF253O75346 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.96□□□□□ -0.49
ZNF253O75346 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZNF253O75346 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ZNF253O75346 ZBED1P1-201ENST00000502364 1930 ntBASIC11.96□□□□□ -0.49
ZNF253O75346 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
ZNF253O75346 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ZNF253O75346 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms