Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.12■□□□□ 0.01
TLR4O00206 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.12■□□□□ 0.01
TLR4O00206 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.12■□□□□ 0.01
TLR4O00206 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.12■□□□□ 0.01
TLR4O00206 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 AL008638.5-201ENST00000623814 1298 ntBASIC15.12■□□□□ 0.01
TLR4O00206 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
TLR4O00206 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TLR4O00206 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.12■□□□□ 0.01
TLR4O00206 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
TLR4O00206 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TLR4O00206 AC022532.1-201ENST00000624563 1728 ntBASIC15.12■□□□□ 0.01
TLR4O00206 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.11■□□□□ 0.01
TLR4O00206 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.11■□□□□ 0.01
TLR4O00206 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.11■□□□□ 0.01
TLR4O00206 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 RPSAP36-202ENST00000494591 1261 ntBASIC15.11■□□□□ 0.01
TLR4O00206 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.11■□□□□ 0.01
TLR4O00206 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.11■□□□□ 0.01
TLR4O00206 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TLR4O00206 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.11■□□□□ 0.01
TLR4O00206 AC104982.3-201ENST00000581995 514 ntBASIC15.11■□□□□ 0.01
TLR4O00206 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.11■□□□□ 0.01
TLR4O00206 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 ENPP7P14-201ENST00000621765 1040 ntBASIC15.11■□□□□ 0.01
TLR4O00206 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 AC126755.1-201ENST00000525846 6405 ntBASIC15.11■□□□□ 0.01
TLR4O00206 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TLR4O00206 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TLR4O00206 AC084364.1-201ENST00000551967 1556 ntBASIC15.11■□□□□ 0.01
TLR4O00206 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TLR4O00206 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.11■□□□□ 0.01
TLR4O00206 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AL158070.2-201ENST00000623713 1621 ntBASIC15.1■□□□□ 0.01
TLR4O00206 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TLR4O00206 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.1■□□□□ 0.01
TLR4O00206 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.1■□□□□ 0.01
TLR4O00206 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.1■□□□□ 0.01
TLR4O00206 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.1■□□□□ 0.01
TLR4O00206 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.1■□□□□ 0.01
TLR4O00206 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.1■□□□□ 0.01
TLR4O00206 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms