Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CFAP99D6REC4 PPT1-215ENST00000641471 2368 ntBASIC15.32■□□□□ 0.04
CFAP99D6REC4 AC026748.1-201ENST00000624349 3251 ntBASIC15.32■□□□□ 0.04
CFAP99D6REC4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CFAP99D6REC4 AC148477.4-201ENST00000613430 1793 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 AC134915.1-201ENST00000426461 574 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 VDAC1P7-201ENST00000462417 847 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 TMEM261P1-201ENST00000604899 340 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 INTS4P2-202ENST00000614726 2019 ntBASIC15.31■□□□□ 0.04
CFAP99D6REC4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.31■□□□□ 0.04
CFAP99D6REC4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CFAP99D6REC4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 KRT8P44-201ENST00000441609 1350 ntBASIC15.3■□□□□ 0.04
CFAP99D6REC4 CRB3P1-201ENST00000449338 276 ntBASIC15.3■□□□□ 0.04
CFAP99D6REC4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.3■□□□□ 0.04
CFAP99D6REC4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AC092552.1-201ENST00000547243 906 ntBASIC15.3■□□□□ 0.04
CFAP99D6REC4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 AC138761.1-201ENST00000584393 385 ntBASIC15.3■□□□□ 0.04
CFAP99D6REC4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CFAP99D6REC4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CFAP99D6REC4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms