Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AL596325.1-201ENST00000563991 1082 ntBASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 CICP24-201ENST00000605464 2705 ntBASIC14.46□□□□□ -0.09
ATG4BQ9Y4P1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.46□□□□□ -0.1
ATG4BQ9Y4P1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AL645937.2-201ENST00000396808 931 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 HLA-K-203ENST00000430151 1046 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AL035252.4-201ENST00000624174 288 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC005252.2-201ENST00000624630 1141 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 PRSS30P-206ENST00000641773 873 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 LILRP1-201ENST00000444199 1370 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC007326.2-201ENST00000624224 7579 ntBASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATG4BQ9Y4P1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
ATG4BQ9Y4P1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms