Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 AP002353.1-201ENST00000528257 1599 ntBASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RIMBP3Q9UFD9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 REXO1L4P-201ENST00000605109 1937 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 ZNF877P-201ENST00000437614 612 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 AL590556.2-202ENST00000636906 844 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 MIR339-201ENST00000362153 94 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 TPT1P11-201ENST00000458482 498 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 AC132812.1-201ENST00000583145 892 ntBASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC23.19■■□□□ 1.3
RIMBP3Q9UFD9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 FAM226B-201ENST00000602508 1490 ntBASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 AC106785.2-201ENST00000564385 1319 ntBASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 RN7SL523P-201ENST00000484401 298 ntBASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 GAS7-216ENST00000583882 553 ntTSL 5 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC23.18■■□□□ 1.3
RIMBP3Q9UFD9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 AC019109.1-201ENST00000401725 1874 ntBASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 SAT1-201ENST00000379251 801 ntTSL 2 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 SAT1-202ENST00000379253 909 ntTSL 2 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 SAT1-203ENST00000379254 868 ntTSL 3 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 PPP1R2P4-201ENST00000424051 595 ntBASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 AL136982.5-201ENST00000605222 294 ntBASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RIMBP3Q9UFD9 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 AC009517.1-201ENST00000454750 570 ntBASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 AGGF1P1-201ENST00000509500 2073 ntBASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
RIMBP3Q9UFD9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 CES1P2-201ENST00000566467 1242 ntBASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC106782.5-201ENST00000616011 337 ntBASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 AC026336.4-201ENST00000624565 1050 ntBASIC23.15■■□□□ 1.3
RIMBP3Q9UFD9 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms