Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AC132938.2-201ENST00000579188 680 ntBASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AL591163.1-201ENST00000641757 987 ntBASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 KRT8P22-201ENST00000562317 1415 ntBASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 REXO1L4P-201ENST00000605109 1937 ntBASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.82□□□□□ -0.04
CUEDC1Q9NWM3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC104457.1-201ENST00000401024 814 ntBASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 SOCS2P1-201ENST00000417727 557 ntBASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 AC133539.2-201ENST00000604757 467 ntBASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CUEDC1Q9NWM3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AP000845.1-201ENST00000581677 2131 ntBASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC093813.1-201ENST00000605066 256 ntBASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 MROH4P-201ENST00000431302 1578 ntBASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 AC007787.1-201ENST00000588095 1583 ntBASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CUEDC1Q9NWM3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms