Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-3Q9BYR6 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AL359854.1-201ENST00000614203 1594 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 Y_RNA.128-201ENST00000363391 112 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RNU11-6P-201ENST00000391127 133 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RN7SKP228-201ENST00000411042 263 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RNU4-74P-201ENST00000411280 161 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RAB28P1-201ENST00000411517 641 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RPS3AP9-201ENST00000417027 792 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC009303.1-201ENST00000426307 352 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC007322.3-201ENST00000426526 701 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 SNRPEP4-201ENST00000435815 279 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 SERBP1P2-201ENST00000436888 1164 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 UGT1A12P-201ENST00000447084 853 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC007967.1-201ENST00000455422 1159 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 OR52A4P-201ENST00000472867 958 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CBX1P5-201ENST00000475330 559 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 LINC00698-204ENST00000475886 758 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RPSAP47-201ENST00000479228 888 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RPL23AP44-201ENST00000482216 473 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CREM-239ENST00000489321 731 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 IL18-202ENST00000524595 1090 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AP005597.4-201ENST00000526762 229 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CHORDC1-207ENST00000530765 564 ntTSL 4 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CCDC92B-201ENST00000575506 885 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC015688.2-201ENST00000584523 262 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AL512631.1-201ENST00000604086 840 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AL133215.3-201ENST00000609801 448 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC117490.2-201ENST00000610042 594 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC243756.2-201ENST00000618406 463 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AC148477.7-201ENST00000623871 428 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 HFE2-207ENST00000636675 1280 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PPBPP2-201ENST00000513150 1362 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 TEX21P-201ENST00000447107 1476 ntBASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
KRTAP3-3Q9BYR6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms