Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCL13Q99616 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CCL13Q99616 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.81□□□□□ -0.36
CCL13Q99616 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL13Q99616 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC005252.2-201ENST00000624630 1141 ntBASIC12.81□□□□□ -0.36
CCL13Q99616 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CCL13Q99616 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL13Q99616 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL13Q99616 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL13Q99616 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 REXO1L4P-201ENST00000605109 1937 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CCL13Q99616 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL13Q99616 RN7SL837P-201ENST00000463010 287 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL13Q99616 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.8□□□□□ -0.36
CCL13Q99616 CLUHP6-201ENST00000580789 941 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 AC010319.3-201ENST00000597028 470 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCL13Q99616 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 AC093525.8-201ENST00000624099 1342 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 WASH3P-207ENST00000560956 1394 ntBASIC12.8□□□□□ -0.36
CCL13Q99616 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL13Q99616 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.8□□□□□ -0.36
CCL13Q99616 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCL13Q99616 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 CU639417.3-201ENST00000624240 1404 ntBASIC12.79□□□□□ -0.36
CCL13Q99616 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL13Q99616 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL13Q99616 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL13Q99616 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms