Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AC026410.3-201ENST00000514280 936 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AP000845.1-201ENST00000581677 2131 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AL096865.1-201ENST00000606796 927 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 AC099568.2-201ENST00000609194 695 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 MIR8072-201ENST00000614241 80 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.77□□□□□ -0.21
NHLRC1Q6VVB1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AC232323.1-201ENST00000540724 2099 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 REXO1L5P-201ENST00000622260 2098 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SLC7A15P-201ENST00000424028 1363 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 WASH3P-207ENST00000560956 1394 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 BCRP1-201ENST00000444246 691 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 FAM86LP-201ENST00000478302 853 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SERBP1P5-201ENST00000510079 1181 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 TPRX2P-201ENST00000535362 881 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 SPCS2P1-201ENST00000561636 679 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 RRP7BP-205ENST00000566851 833 ntBASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.76□□□□□ -0.21
NHLRC1Q6VVB1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms