Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC38Q5VT99 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 BX640514.1-201ENST00000583223 1918 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AL139094.1-201ENST00000405549 1188 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 RFPL4AP1-201ENST00000530883 850 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AC055876.2-201ENST00000531834 546 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AC120045.2-201ENST00000567334 178 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AC007431.3-201ENST00000623221 587 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 INTS4P2-202ENST00000614726 2019 ntBASIC15.82■□□□□ 0.12
LRRC38Q5VT99 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC38Q5VT99 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 KRT8P14-201ENST00000414254 1442 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 SLC7A15P-201ENST00000424028 1363 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 AC134915.1-201ENST00000426461 574 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 AL442647.2-201ENST00000429864 857 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 AC093214.1-201ENST00000511688 1107 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 RNA5SP421-201ENST00000516864 134 ntBASIC15.81■□□□□ 0.12
LRRC38Q5VT99 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRC38Q5VT99 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms