Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 SAMD11P1-201ENST00000571429 661 ntBASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 CU639417.3-201ENST00000624240 1404 ntBASIC15.26■□□□□ 0.03
LDLRAP1Q5SW96 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC026748.1-201ENST00000624349 3251 ntBASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC104457.1-201ENST00000401024 814 ntBASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.25■□□□□ 0.03
LDLRAP1Q5SW96 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LDLRAP1Q5SW96 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LDLRAP1Q5SW96 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LDLRAP1Q5SW96 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LDLRAP1Q5SW96 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LDLRAP1Q5SW96 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms