Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 DUX4L46-201ENST00000566845 751 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AC005324.6-201ENST00000587972 613 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AC132192.2-201ENST00000596206 1147 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 BNIP3P13-201ENST00000599968 566 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.09■□□□□ 0.49
PDS5AQ29RF7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.09■□□□□ 0.49
PDS5AQ29RF7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.08■□□□□ 0.49
PDS5AQ29RF7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.08■□□□□ 0.49
PDS5AQ29RF7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 PPT1-215ENST00000641471 2368 ntBASIC18.08■□□□□ 0.48
PDS5AQ29RF7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.08■□□□□ 0.48
PDS5AQ29RF7 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 AC006058.4-201ENST00000624016 1670 ntBASIC18.07■□□□□ 0.48
PDS5AQ29RF7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDS5AQ29RF7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms