Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC20.1■□□□□ 0.81
ZC3H6P61129 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC20.1■□□□□ 0.81
ZC3H6P61129 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC20.1■□□□□ 0.81
ZC3H6P61129 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.1■□□□□ 0.81
ZC3H6P61129 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC20.1■□□□□ 0.81
ZC3H6P61129 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZC3H6P61129 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZC3H6P61129 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H6P61129 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H6P61129 REXO1L4P-201ENST00000605109 1937 ntBASIC20.1■□□□□ 0.81
ZC3H6P61129 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.09■□□□□ 0.81
ZC3H6P61129 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 AL138725.1-201ENST00000407347 1314 ntBASIC20.09■□□□□ 0.81
ZC3H6P61129 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 AC078875.1-201ENST00000431907 724 ntBASIC20.09■□□□□ 0.81
ZC3H6P61129 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.09■□□□□ 0.81
ZC3H6P61129 RN7SL258P-201ENST00000478664 300 ntBASIC20.09■□□□□ 0.81
ZC3H6P61129 CTBP2P4-201ENST00000513884 920 ntBASIC20.09■□□□□ 0.81
ZC3H6P61129 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.09■□□□□ 0.81
ZC3H6P61129 AP002803.1-201ENST00000528836 498 ntBASIC20.09■□□□□ 0.81
ZC3H6P61129 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.09■□□□□ 0.81
ZC3H6P61129 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 GMFG-209ENST00000600322 622 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC20.09■□□□□ 0.81
ZC3H6P61129 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZC3H6P61129 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZC3H6P61129 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZC3H6P61129 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 AC026320.2-201ENST00000434379 478 ntBASIC20.08■□□□□ 0.81
ZC3H6P61129 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.08■□□□□ 0.81
ZC3H6P61129 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
ZC3H6P61129 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZC3H6P61129 MIR3677-201ENST00000578964 60 ntBASIC20.08■□□□□ 0.81
ZC3H6P61129 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.08■□□□□ 0.81
ZC3H6P61129 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.08■□□□□ 0.81
ZC3H6P61129 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.08■□□□□ 0.81
ZC3H6P61129 AC009884.2-201ENST00000603110 324 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms